Transcript: ENST00000549987.1 CHURC1-FNTB-001

Description

CHURC1-FNTB readthrough [Source:HGNC Symbol;Acc:42960]

Location

About this transcript

This transcript has 14 exons, is annotated with 9 domains and features, is associated with 63991 variant alleles and maps to 503 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000549987.1	CHURC1-FNTB-001	1468	472aa	ENSP00000447121.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3KSC2 B4DJ86 B4DL54 H0YHI0	NM_001202559.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000553743.1	CHURC1-FNTB-004	207	69aa	ENSP00000450692.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0YJ25	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000552941.1	CHURC1-FNTB-002	1847	107aa	ENSP00000449668.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000551823.1	CHURC1-FNTB-003	517	85aa	ENSP00000449709.1	Nonsense mediated decay	H0YIM9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 1,468 bps, Translation length: 472 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000549987.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000408068 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.