Transcript: ENST00000539550.1 TLE3-022

Description

transducin-like enhancer of split 3 (E(sp1) homolog, Drosophila) [Source:HGNC Symbol;Acc:11839]

Gene Synonyms

ESG, ESG3, GRG3, HsT18976, KIAA1547

Location

Chromosome 15: 70,342,141-70,387,124 reverse strand.

About this transcript

This transcript has 18 exons, is annotated with 33 domains and features, is associated with 20383 variant alleles and maps to 517 oligo probes.

Gene

This transcript is a product of gene ENSG00000140332.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000558939.1	TLE3-001	6004	772aa	ENSP00000452871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45293	H0YNT2 Q04726	NM_001282979.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000442299.2	TLE3-201	5307	764aa	ENSP00000390007.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W8S3 H0YNI7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000317509.8	TLE3-004	5207	760aa	ENSP00000319233.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58375	Q04726	NM_020908.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000557997.1	TLE3-016	3683	764aa	ENSP00000453083.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61692	H0YNI7 Q04726	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000560589.1	TLE3-012	3509	716aa	ENSP00000454141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNT2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000559929.1	TLE3-013	3408	782aa	ENSP00000453081.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YL70 H3BUH5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000560939.1	TLE3-020	3021	774aa	ENSP00000452933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4E2W3 H0YKT5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000559048.1	TLE3-007	2918	772aa	ENSP00000453760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNI7 Q04726	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000558201.1	TLE3-011	2766	778aa	ENSP00000452881.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKN8 H0YNT2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440567.3	TLE3-010	2657	762aa	ENSP00000415057.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61689	B4E2W3 F8W964	NM_001282981.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000539550.1	TLE3-022	2464	699aa	ENSP00000442594.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H7D6 H0YNI7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000451782.2	TLE3-030	2356	769aa	ENSP00000394717.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45294	B4E2W3 Q04726	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000558379.1	TLE3-008	2304	767aa	ENSP00000453435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61691	H0YNI7 Q6PI57	NM_001282980.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000557907.1	TLE3-015	2295	764aa	ENSP00000453107.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61692	H0YNI7 Q04726	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000559191.1	TLE3-009	1575	353aa	ENSP00000454029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YNI7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000560996.1	TLE3-014	495	103aa	ENSP00000457641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUH5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557984.1	TLE3-026	478	154aa	ENSP00000452809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YKH5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000557919.1	TLE3-017	4294	445aa	ENSP00000452803.1	Nonsense mediated decay		H0YKH0	-	-
ENST00000561453.1	TLE3-002	3719	448aa	ENSP00000453373.1	Nonsense mediated decay		H0YLW9	-	-
ENST00000560525.1	TLE3-019	3647	611aa	ENSP00000453219.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000537387.2	TLE3-024	457	39aa	ENSP00000456178.1	Nonsense mediated decay		Q672R2	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000559574.1	TLE3-025	325	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000557815.1	TLE3-023	7809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000542329.2	TLE3-028	664	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559608.1	TLE3-029	519	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000559826.1	TLE3-005	354	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,464 bps, Translation length: 699 residues

Version

ENST00000539550.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000416925 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000539550.1 TLE3-022

Summary