Transcript: ENST00000538900.1 CNBD2-005

Description

cyclic nucleotide binding domain containing 2 [Source:HGNC Symbol;Acc:16145]

Gene Synonyms

C20orf152, CNMPD1, dJ954P9.1

Location

About this transcript

This transcript has 11 exons, is annotated with 10 domains and features, is associated with 25682 variant alleles and maps to 343 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000349339.1	CNBD2-003	1927	572aa	ENSP00000340954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13270	Q96M20	NM_080834.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000373973.3	CNBD2-001	1956	576aa	ENSP00000363084.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96M20	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538900.1	CNBD2-005	1722	423aa	ENSP00000442729.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56189	Q96M20	NM_001207076.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000463258.2	CNBD2-006	1426	144aa	ENSP00000476014.1	Nonsense mediated decay		U3KQM1	-	-
ENST00000489667.1	CNBD2-002	2531	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,722 bps, Translation length: 423 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96M20

CCDS

This transcript is a member of the Human CCDS set: CCDS56189

Version

ENST00000538900.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000470223 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.