Transcript: ENST00000538004.1 NEK7-006

Description

NIMA-related kinase 7 [Source:HGNC Symbol;Acc:13386]

Location

Chromosome 1: 198,126,128-198,288,652 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 68518 variant alleles and maps to 290 oligo probes.

Gene

This transcript is a product of gene ENSG00000151414.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367385.4	NEK7-001	4149	302aa	ENSP00000356355.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1394	C9J1H8 F5H3U7 F8WAG2 Q8TDX7	NM_133494.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000538004.1	NEK7-006	1036	302aa	ENSP00000444621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1394	C9J1H8 F5H3U7 F8WAG2 Q8TDX7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000391974.3	NEK7-008	587	82aa	ENSP00000375835.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1H8 F5H3U7 F8WAG2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000367383.1	NEK7-003	586	119aa	ENSP00000356353.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1H8 F5H3U7 Q8TDX7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544035.1	NEK7-007	565	62aa	ENSP00000439095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1H8 F5H3U7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000442588.1	NEK7-005	519	32aa	ENSP00000392745.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J1H8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000417895.1	NEK7-004	409	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493790.1	NEK7-002	1021	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,036 bps, Translation length: 302 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TDX7

CCDS

This transcript is a member of the Human CCDS set: CCDS1394

Version

ENST00000538004.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000399550 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000538004.1 NEK7-006

Summary