Transcript: ENST00000537670.1 LCTL-003

Description

lactase-like [Source:HGNC Symbol;Acc:15583]

Gene Synonyms

FLJ33279, KLG, KLPH

Location

About this transcript

This transcript has 12 exons, is annotated with 14 domains and features, is associated with 8279 variant alleles and maps to 373 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000341509.5	LCTL-001	3147	567aa	ENSP00000343490.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10220	B3KQY0 Q6UWM7	NM_207338.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000537670.1	LCTL-003	2552	394aa	ENSP00000445419.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS61678	B3KQY0	NM_001278562.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000565875.1	LCTL-002	1451	36aa	ENSP00000455793.1	Nonsense mediated decay		H3BQI3	-	-
ENST00000563438.1	LCTL-005	571	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000562179.1	LCTL-004	210	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 9, Transcript length: 2,552 bps, Translation length: 394 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS61678

Version

ENST00000537670.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000420757 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.