Transcript: ENST00000536821.1 TMED3-006

Description

transmembrane emp24 protein transport domain containing 3 [Source:HGNC Symbol;Acc:28889]

Gene Synonyms

C15orf22, P24B, p24B, p26

Location

About this transcript

This transcript has 3 exons, is annotated with 8 domains and features, is associated with 30104 variant alleles and maps to 127 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000299705.5	TMED3-001	1475	217aa	ENSP00000299705.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10310	Q9UMB6 Q9Y3Q3	NM_007364.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000424155.2	TMED3-005	1115	173aa	ENSP00000414983.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y3Q3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000536821.1	TMED3-006	1004	155aa	ENSP00000446062.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4M7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000543455.1	TMED3-004	1483	146aa	ENSP00000440228.1	Nonsense mediated decay		G3V1J9	-	-
ENST00000558562.1	TMED3-003	938	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,004 bps, Translation length: 155 residues

Version

ENST00000536821.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000416715 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.