Transcript: ENST00000534087.2 FLI1-003

Description

Fli-1 proto-oncogene, ETS transcription factor [Source:HGNC Symbol;Acc:3749]

Gene Synonyms

EWSR2, SIC-1

Location

Chromosome 11: 128,563,987-128,683,162 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 52609 variant alleles and maps to 622 oligo probes.

Gene

This transcript is a product of gene ENSG00000151702.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000527786.2	FLI1-001	4127	452aa	ENSP00000433488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44768	-	NM_002017.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000344954.6	FLI1-202	3926	419aa	ENSP00000339627.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53725	Q01543	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534087.2	FLI1-003	3859	419aa	ENSP00000432950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53725	Q01543	NM_001167681.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000281428.8	FLI1-201	3439	386aa	ENSP00000281428.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59231	Q01543	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000525560.1	FLI1-203	1557	259aa	ENSP00000437124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59230	Q01543	NM_001271012.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000527767.3	FLI1-008	561	106aa	ENSP00000476428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000429175.3	FLI1-002	3130	82aa	ENSP00000399985.3	Nonsense mediated decay		E9PKJ7 Q01543	-	-
ENST00000608303.1	FLI1-004	2577	49aa	ENSP00000477262.1	Nonsense mediated decay		-	-	-
ENST00000528790.1	FLI1-006	5370	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000608055.1	FLI1-007	620	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 8, Transcript length: 3,859 bps, Translation length: 419 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q01543

CCDS

This transcript is a member of the Human CCDS set: CCDS53725

Version

ENST00000534087.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386228 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000534087.2 FLI1-003

Summary