Transcript: ENST00000532699.1 SDHD-002

Description

Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:H3BRW5]

Gene Synonyms

SDH4

Location

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 45825 variant alleles and maps to 229 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000532699.1	SDHD-002	571	140aa	ENSP00000456434.1	Nonsense mediated decay	G3V173 H3BRW5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000531744.1	SDHD-001	566	140aa	ENSP00000456957.1	Nonsense mediated decay	G3V173 H3BRW5	-	-
ENST00000525468.1	SDHD-003	435	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000525987.1	SDHD-004	968	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 6, Coding exons: 4, Transcript length: 571 bps, Translation length: 140 residues

Version

ENST00000532699.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000393483 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.