Transcript: ENST00000529694.1 KCNJ5-001

Description

potassium inwardly-rectifying channel, subfamily J, member 5 [Source:HGNC Symbol;Acc:6266]

Gene Synonyms

CIR, GIRK4, KATP1, KIR3.4, Kir3.4, LQT13

Location

About this transcript

This transcript has 3 exons, is annotated with 22 domains and features, is associated with 14184 variant alleles and maps to 575 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000529694.1	KCNJ5-001	5940	419aa	ENSP00000433295.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8479	H9A8K9 H9A8L0 P48544	NM_000890.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000338350.4	KCNJ5-003	1734	419aa	ENSP00000339960.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8479	H9A8K9 H9A8L0 P48544	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000533599.1	KCNJ5-002	1350	419aa	ENSP00000434266.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8479	H9A8K9 H9A8L0 P48544	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 5,940 bps, Translation length: 419 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48544

CCDS

This transcript is a member of the Human CCDS set: CCDS8479

Version

ENST00000529694.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000386238 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.