Transcript: ENST00000528712.1 GATA4-004

Description

GATA binding protein 4 [Source:HGNC Symbol;Acc:4173]

Gene Synonyms

ASD2, TACHD, VSD1

Location

Chromosome 8: 11,534,468-11,617,509 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 18 domains and features, is associated with 48518 variant alleles and maps to 440 oligo probes.

Gene

This transcript is a product of gene ENSG00000136574.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000335135.4	GATA4-001	3414	442aa	ENSP00000334458.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5983	B2ZBW1 B3KUF4 E9PKS4 E9PRI5 P43694 R4GND5	NM_002052.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528712.1	GATA4-004	2614	236aa	ENSP00000435043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2ZBW1 B3KUF4 E9PKS4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000532059.1	GATA4-005	1459	443aa	ENSP00000435712.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2ZBW1 B3KUF4 B7ZKZ4 E9PKS4 E9PRI5 R4GND5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528027.1	GATA4-002	1010	116aa	ENSP00000432278.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PRI5 R4GND5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532977.1	GATA4-003	877	16aa	ENSP00000473671.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526974.1	GATA4-006	832	23aa	ENSP00000473598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		R4GND5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526716.1	GATA4-007	686	175aa	ENSP00000435347.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B2ZBW1 E9PKS4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526021.1	GATA4-008	1064	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 2,614 bps, Translation length: 236 residues

Version

ENST00000528712.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000383654 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000528712.1 GATA4-004

Summary