Transcript: ENST00000525729.1 C11orf65-002

Description

chromosome 11 open reading frame 65 [Source:HGNC Symbol;Acc:28519]

Gene Synonyms

MGC33948

Location

Chromosome 11: 108,179,246-108,338,258 reverse strand.

About this transcript

This transcript has 7 exons, is associated with 83736 variant alleles and maps to 233 oligo probes.

Gene

This transcript is a product of gene ENSG00000166323.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393084.1	C11orf65-201	1033	313aa	ENSP00000376799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8340	Q8NCR3	NM_152587.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000525729.1	C11orf65-002	1263	246aa	ENSP00000433395.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DZU4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000529391.1	C11orf65-001	973	313aa	ENSP00000436400.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8340	Q8NCR3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000533583.1	C11orf65-004	582	190aa	ENSP00000434500.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PQ22	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000524755.1	C11orf65-005	456	105aa	ENSP00000432827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000527531.1	C11orf65-003	2683	313aa	ENSP00000431706.1	Nonsense mediated decay	CCDS8340	Q8NCR3	-	-
ENST00000526725.1	C11orf65-006	477	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,263 bps, Translation length: 246 residues

Version

ENST00000525729.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000390268 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000525729.1 C11orf65-002

Summary