Transcript: ENST00000519728.1 LYN-002

Description

v-yes-1 Yamaguchi sarcoma viral related oncogene homolog [Source:HGNC Symbol;Acc:6735]

Gene Synonyms

JTK8, p53Lyn, p56Lyn

Location

About this transcript

This transcript has 13 exons, is annotated with 35 domains and features, is associated with 54928 variant alleles and maps to 721 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000519728.1	LYN-002	2297	512aa	ENSP00000428924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6162	B4DQ79 E5RJ37 P07948	NM_002350.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000520220.2	LYN-003	3021	491aa	ENSP00000428424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47859	B4DQ79 P07948 Q6NUK7	NM_001111097.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000520050.1	LYN-006	550	150aa	ENSP00000428313.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420292.1	LYN-001	561	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,297 bps, Translation length: 512 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P07948

CCDS

This transcript is a member of the Human CCDS set: CCDS6162

Version

ENST00000519728.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000378155 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.