Transcript: ENST00000519030.1 EIF3E-002

Description

eukaryotic translation initiation factor 3, subunit E [Source:HGNC Symbol;Acc:3277]

Gene Synonyms

EIF3-P48, EIF3E, EIF3S6, INT6, eIF3-p46, eIF3-p48, eIF3e

Location

Chromosome 8: 109,214,009-109,260,927 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 9 domains and features, is associated with 21100 variant alleles and maps to 437 oligo probes.

Gene

This transcript is a product of gene ENSG00000104408.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000220849.5	EIF3E-001	1543	445aa	ENSP00000220849.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6308	B3KW56 E5RGA2 E5RIT4 P60228	NM_001568.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000519030.1	EIF3E-002	1324	352aa	ENSP00000428796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RGA2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000521440.1	EIF3E-011	746	171aa	ENSP00000430152.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIT4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519627.1	EIF3E-008	697	226aa	ENSP00000430839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHS5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000522352.1	EIF3E-015	611	156aa	ENSP00000428170.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000518345.1	EIF3E-007	558	75aa	ENSP00000430678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIT4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521297.1	EIF3E-010	223	74aa	ENSP00000429968.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000522445.1	EIF3E-009	841	75aa	ENSP00000430709.1	Nonsense mediated decay		E5RII3	-	-
ENST00000518100.1	EIF3E-006	687	45aa	ENSP00000429327.1	Nonsense mediated decay		E5RIP5	-	-
ENST00000522887.1	EIF3E-005	575	56aa	ENSP00000430649.1	Nonsense mediated decay		E5RJ25	-	-
ENST00000519517.1	EIF3E-012	726	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000522088.1	EIF3E-018	715	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000518634.1	EIF3E-017	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000519413.1	EIF3E-014	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000521614.1	EIF3E-004	1990	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518442.1	EIF3E-003	1285	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523674.1	EIF3E-016	1072	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000523646.1	EIF3E-013	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,324 bps, Translation length: 352 residues

Version

ENST00000519030.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000380613 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000519030.1 EIF3E-002

Summary