Transcript: ENST00000515435.1 CSNK1A1-004

Description

casein kinase 1, alpha 1 [Source:HGNC Symbol;Acc:2451]

Gene Synonyms

CK1, CK1a, CK1alpha, CKIa, CKIalpha, HLCDGP1, PRO2975

Location

Chromosome 5: 148,875,617-148,929,862 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 11 domains and features, is associated with 23738 variant alleles and maps to 617 oligo probes.

Gene

This transcript is a product of gene ENSG00000113712.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000515768.1	CSNK1A1-003	1098	365aa	ENSP00000421689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47304	B4DER9 P48729 U3KPX3 U3KQ83	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000261798.5	CSNK1A1-001	6067	325aa	ENSP00000261798.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS64291	D6REM4 Q71TU5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000377843.2	CSNK1A1-201	3065	337aa	ENSP00000367074.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47303	B4E1D9 P48729 U3KPX3 U3KQ83	NM_001892.5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000515435.1	CSNK1A1-004	1856	264aa	ENSP00000427031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DFH4 E7ETM0	NM_001271742.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000504676.1	CSNK1A1-002	1772	236aa	ENSP00000426747.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REM4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000503350.2	CSNK1A1-006	1099	167aa	ENSP00000425366.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ83	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000606299.1	CSNK1A1-009	1075	96aa	ENSP00000475633.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KQ83	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000606719.1	CSNK1A1-008	835	134aa	ENSP00000475319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		U3KPX3 U3KQ83	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000515748.2	CSNK1A1-005	620	89aa	ENSP00000421268.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGE5	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000606826.1	CSNK1A1-010	800	184aa	ENSP00000475969.1	Nonsense mediated decay		U3KQ83	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000523203.1	CSNK1A1-007	775	78aa	ENSP00000430252.1	Nonsense mediated decay		E5RG27	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,856 bps, Translation length: 264 residues

Version

ENST00000515435.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000373585 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000515435.1 CSNK1A1-004

Summary