Transcript: ENST00000510019.1 RPS23-005

Description

ribosomal protein S23 [Source:HGNC Symbol;Acc:10410]

Gene Synonyms

S23

Location

Chromosome 5: 81,571,240-81,574,215 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 6 domains and features, is associated with 1857 variant alleles and maps to 340 oligo probes.

Gene

This transcript is a product of gene ENSG00000186468.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000296674.8	RPS23-001	3437	143aa	ENSP00000296674.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47241	A8K517 D6RDJ2 P62266	NM_001025.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000510210.1	RPS23-008	1058	134aa	ENSP00000427043.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD47 D6RDJ2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000510019.1	RPS23-005	1019	85aa	ENSP00000425833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDJ2 D6RIX0	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000507980.1	RPS23-006	836	123aa	ENSP00000422071.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9I7 D6RDJ2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000511844.1	RPS23-002	530	55aa	ENSP00000420900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RDJ2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000512493.1	RPS23-007	443	134aa	ENSP00000425865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RD47 D6RDJ2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000503605.1	RPS23-003	595	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000504293.1	RPS23-004	576	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,019 bps, Translation length: 85 residues

Version

ENST00000510019.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000369550 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000510019.1 RPS23-005

Summary