Transcript: ENST00000507544.2 COX18-006

Description

COX18 cytochrome C oxidase assembly factor [Source:HGNC Symbol;Acc:26801]

Gene Synonyms

COX18HS, FLJ38991, OXA1L2

Location

About this transcript

This transcript has 6 exons, is annotated with 6 domains and features, is associated with 5448 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295890.4	COX18-001	3128	333aa	ENSP00000295890.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3554	Q8N8Q8	NM_173827.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000507544.2	COX18-006	1086	334aa	ENSP00000425261.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZL88	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000449739.2	COX18-003	3027	129aa	ENSP00000394583.2	Nonsense mediated decay		Q8N8Q8	-	-
ENST00000510031.1	COX18-004	1083	127aa	ENSP00000424978.1	Nonsense mediated decay		Q8N8Q8	-	-
ENST00000421792.2	COX18-002	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,086 bps, Translation length: 334 residues

Version

ENST00000507544.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000362421 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.