Transcript: ENST00000498619.1 CASR-002

Description

calcium-sensing receptor [Source:HGNC Symbol;Acc:1514]

Gene Synonyms

CAR, EIG8, FHH, FIH, GPRC2A, HHC, HHC1, HYPOC1, NSHPT, PCAR1

Location

About this transcript

This transcript has 7 exons, is annotated with 51 domains and features, is associated with 43455 variant alleles and maps to 644 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000498619.1	CASR-002	5009	1088aa	ENSP00000420194.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54632	E7ENE0 Q2F3K2 Q2F3K3 Q2F3K4 Q2F3K5 Q2F3K6	NM_001178065.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000490131.1	CASR-001	3783	1078aa	ENSP00000418685.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3010	P41180 Q2F3K3 Q2F3K4 Q2F3K5 Q2F3K6	NM_000388.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000296154.5	CASR-201	3361	1078aa	ENSP00000296154.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3010	P41180 Q2F3K3 Q2F3K4 Q2F3K5 Q2F3K6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000490186.1	CASR-003	602	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 5,009 bps, Translation length: 1,088 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS54632

Version

ENST00000498619.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000355762 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.