Transcript: ENST00000487519.1 TFAM-002

Description

transcription factor A, mitochondrial [Source:HGNC Symbol;Acc:11741]

Gene Synonyms

MTTF1, MTTFA, TCF6, TCF6L1, TCF6L2, TCF6L3

Location

About this transcript

This transcript has 7 exons, is annotated with 14 domains and features, is associated with 6164 variant alleles and maps to 829 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000487519.1	TFAM-002	5414	246aa	ENSP00000420588.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7253	E5KSU5 Q00059	NM_003201.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000373895.3	TFAM-004	973	214aa	ENSP00000363002.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59217	Q00059	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395377.2	TFAM-001	663	219aa	ENSP00000378776.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000373899.3	TFAM-003	1121	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 5,414 bps, Translation length: 246 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q00059

CCDS

This transcript is a member of the Human CCDS set: CCDS7253

Version

ENST00000487519.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000048146 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.