Transcript: ENST00000476979.1 TTC6-002

Description

tetratricopeptide repeat domain 6 [Source:HGNC Symbol;Acc:19739]

Gene Synonyms

C14orf25, NCRNA00291

Location

Chromosome 14: 38,241,588-38,311,899 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 42 domains and features, is associated with 31057 variant alleles and maps to 382 oligo probes.

Gene

This transcript is a product of gene ENSG00000139865.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000553443.1	TTC6-001	5833	1886aa	ENSP00000451131.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V3A5 Q3SY87	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000476979.1	TTC6-002	2253	520aa	ENSP00000417788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86TZ1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000382320.3	TTC6-202	2193	536aa	ENSP00000371757.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H0YJ01 Q3SY88	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000267368.7	TTC6-201	2113	520aa	ENSP00000267368.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q86TZ1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000556845.1	TTC6-006	511	38aa	ENSP00000450572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3V2C3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000533625.1	TTC6-005	3567	440aa	ENSP00000451566.1	Nonsense mediated decay	G3V435	-	-
ENST00000478811.2	TTC6-003	2193	553aa	ENSP00000419204.2	Nonsense mediated decay	G5E9W5 H0YJ01 Q3SY88	-	-
ENST00000555921.1	TTC6-007	538	78aa	ENSP00000450568.1	Nonsense mediated decay	H0YJ01	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000554555.1	TTC6-004	535	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000553887.1	TTC6-008	305	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-

Summary

Statistics

Exons: 13, Coding exons: 11, Transcript length: 2,253 bps, Translation length: 520 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86TZ1

Version

ENST00000476979.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000348621 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000476979.1 TTC6-002

Summary