Transcript: ENST00000461135.2 C1orf116-003

Description

chromosome 1 open reading frame 116 [Source:HGNC Symbol;Acc:28667]

Gene Synonyms

C1orf116, FLJ36507, MGC2742, MGC4309, SARG

Location

About this transcript

This transcript has 3 exons, is annotated with 5 domains and features, is associated with 5514 variant alleles and maps to 375 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000359470.5	C1orf116-001	5493	601aa	ENSP00000352447.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1475	Q9BW04	NM_023938.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000461135.2	C1orf116-003	3142	355aa	ENSP00000436862.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44306	Q9BW04	NM_001083924.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 3,142 bps, Translation length: 355 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BW04

CCDS

This transcript is a member of the Human CCDS set: CCDS44306

Version

ENST00000461135.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000382045 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.