Transcript: ENST00000455077.1 SLC4A7-004

Description

solute carrier family 4, sodium bicarbonate cotransporter, member 7 [Source:HGNC Symbol;Acc:11033]

Gene Synonyms

BT, NBC2, NBC2B, NBC3, NBCN1, NBCn1, SBC2, SLC4A6

Location

Chromosome 3: 27,418,097-27,525,838 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 39 domains and features, is associated with 48343 variant alleles and maps to 637 oligo probes.

Gene

This transcript is a product of gene ENSG00000033867.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000295736.5	SLC4A7-001	7757	1214aa	ENSP00000295736.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33721	Q9Y6M7	NM_003615.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428386.1	SLC4A7-002	7385	1090aa	ENSP00000416368.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58819	Q9Y6M7	NM_001258380.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000419036.1	SLC4A7-003	6447	801aa	ENSP00000411031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3C4	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000454389.1	SLC4A7-014	4159	1259aa	ENSP00000390394.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y6M7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000440156.1	SLC4A7-006	4120	1246aa	ENSP00000414797.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y6M7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000445684.1	SLC4A7-010	4061	1210aa	ENSP00000406804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PFN4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000388777.4	SLC4A7-201	4001	800aa	ENSP00000373429.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y6M7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000446700.1	SLC4A7-011	4000	1206aa	ENSP00000406605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y6M7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000425128.2	SLC4A7-202	3933	574aa	ENSP00000401949.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y6M7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000435667.2	SLC4A7-203	3787	1135aa	ENSP00000395336.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y6M7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000455077.1	SLC4A7-004	3775	1131aa	ENSP00000407382.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58820	Q9Y6M7	NM_001258379.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000437179.1	SLC4A7-005	3667	1095aa	ENSP00000394252.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9Y6M7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000428179.1	SLC4A7-013	3224	1051aa	ENSP00000388703.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JRP1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000438530.1	SLC4A7-009	3825	574aa	ENSP00000407304.1	Nonsense mediated decay		Q9Y6M7	-	-
ENST00000457377.1	SLC4A7-008	3600	463aa	ENSP00000408323.1	Nonsense mediated decay		Q9Y6M7	-	-
ENST00000437266.1	SLC4A7-007	3407	463aa	ENSP00000409418.1	Nonsense mediated decay		Q9Y6M7	-	-
ENST00000428005.1	SLC4A7-012	1572	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475120.1	SLC4A7-016	770	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465487.1	SLC4A7-017	735	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000491211.1	SLC4A7-015	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 3,775 bps, Translation length: 1,131 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y6M7

CCDS

This transcript is a member of the Human CCDS set: CCDS58820

Version

ENST00000455077.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000341243 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000455077.1 SLC4A7-004

Summary