Transcript: ENST00000450849.2 ATCAY-001

Description

ataxia, cerebellar, Cayman type [Source:HGNC Symbol;Acc:779]

Gene Synonyms

BNIP-H, CLAC, KIAA1872

Location

Chromosome 19: 3,880,581-3,928,077 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 10 domains and features, is associated with 24076 variant alleles and maps to 565 oligo probes.

Gene

This transcript is a product of gene ENSG00000167654.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000450849.2	ATCAY-001	5070	371aa	ENSP00000390941.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45923	M0R197 Q86WG3	NM_033064.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000600960.1	ATCAY-004	2904	377aa	ENSP00000470842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R197 Q86WG3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000398448.3	ATCAY-202	1957	377aa	ENSP00000381466.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DS11	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000301260.6	ATCAY-201	1564	377aa	ENSP00000301260.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R197 Q86WG3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000598136.1	ATCAY-005	530	99aa	ENSP00000471731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		M0R197	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000597739.1	ATCAY-002	1957	74aa	ENSP00000472263.1	Nonsense mediated decay		M0R225	-	-
ENST00000595916.1	ATCAY-006	548	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000601323.1	ATCAY-009	498	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 5,070 bps, Translation length: 371 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q86WG3

CCDS

This transcript is a member of the Human CCDS set: CCDS45923

Version

ENST00000450849.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000457872 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000450849.2 ATCAY-001

Summary