Transcript: ENST00000435765.1 PSMC2-001

Description

proteasome (prosome, macropain) 26S subunit, ATPase, 2 [Source:HGNC Symbol;Acc:9548]

Gene Synonyms

MSS1, Nbla10058, S7

Location

Chromosome 7: 102,985,361-103,009,842 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 10176 variant alleles and maps to 601 oligo probes.

Gene

This transcript is a product of gene ENSG00000161057.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000435765.1	PSMC2-001	3054	433aa	ENSP00000391211.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5731	B7Z5E2 C9JLS9 P35998 Q75L23	NM_002803.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000292644.3	PSMC2-201	1526	433aa	ENSP00000292644.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5731	B7Z5E2 C9JLS9 P35998 Q75L23	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544811.1	PSMC2-202	1415	296aa	ENSP00000445546.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z5E2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000457587.1	PSMC2-003	682	130aa	ENSP00000401724.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLS9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000425206.1	PSMC2-002	656	130aa	ENSP00000393027.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLS9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000460021.1	PSMC2-004	733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 3,054 bps, Translation length: 433 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P35998

CCDS

This transcript is a member of the Human CCDS set: CCDS5731

Version

ENST00000435765.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000347922 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000435765.1 PSMC2-001

Summary