Transcript: ENST00000427482.2 SH3GL3-002

Description

SH3-domain GRB2-like 3 [Source:HGNC Symbol;Acc:10832]

Gene Synonyms

CNSA3, EEN-2B-L3, EEN-B2, HsT19371, SH3D2C, SH3P13

Location

Chromosome 15: 84,115,980-84,287,495 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 18 domains and features, is associated with 69504 variant alleles and maps to 525 oligo probes.

Gene

This transcript is a product of gene ENSG00000140600.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000427482.2	SH3GL3-002	1806	347aa	ENSP00000391372.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10325	Q99963 Q9UMB8	NM_003027.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000324537.5	SH3GL3-001	2012	355aa	ENSP00000320092.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q99963 Q9UMB8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535412.1	SH3GL3-202	1752	288aa	ENSP00000439239.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8IVP1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000434347.1	SH3GL3-201	1520	355aa	ENSP00000397871.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q99963 Q9UMB8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000563901.1	SH3GL3-005	1647	65aa	ENSP00000456249.1	Nonsense mediated decay		H3BRH8	-	-
ENST00000564054.1	SH3GL3-006	758	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467735.2	SH3GL3-004	458	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492099.1	SH3GL3-003	1170	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,806 bps, Translation length: 347 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99963

CCDS

This transcript is a member of the Human CCDS set: CCDS10325

Version

ENST00000427482.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000347797 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000427482.2 SH3GL3-002

Summary