Transcript: ENST00000423809.1 RP11-195F19.5-002

Description

HCG2040265, isoform CRA_a; Uncharacterized protein; cDNA FLJ50015 [Source:UniProtKB/TrEMBL;Acc:B7Z3J9]

Location

Chromosome 9: 34,665,025-34,666,109 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 685 variant alleles and maps to 266 oligo probes.

Gene

This transcript is a product of gene ENSG00000187186.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000421828.2	RP11-195F19.5-003	1525	87aa	ENSP00000457701.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z3J9 Q8N3Y9	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000423809.1	RP11-195F19.5-002	477	36aa	ENSP00000455581.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3BQ31	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000416454.1	RP11-195F19.5-001	465	36aa	ENSP00000454254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	H3BQ31	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544078.2	RP11-195F19.5-004	338	87aa	ENSP00000452132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z3J9 Q8N3Y9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000555007.1	RP11-195F19.5-005	351	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 477 bps, Translation length: 36 residues

Version

ENST00000423809.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000001152 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000423809.1 RP11-195F19.5-002

Summary