Transcript: ENST00000413981.1 DGCR6-002

Description

DiGeorge syndrome critical region gene 6 [Source:HGNC Symbol;Acc:2846]

Location

Chromosome 22: 18,893,541-18,899,601 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 2169 variant alleles and maps to 364 oligo probes.

Gene

This transcript is a product of gene ENSG00000183628.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000331444.6	DGCR6-001	1214	220aa	ENSP00000331681.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13753	Q14129 Q6FGH4	NM_005675.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000608842.1	DGCR6-008	1837	144aa	ENSP00000476388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELY4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000413981.1	DGCR6-002	1039	84aa	ENSP00000402409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6FGH4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000483718.1	DGCR6-004	3245	104aa	ENSP00000467483.1	Nonsense mediated decay		K7EPQ2	-	-
ENST00000480608.1	DGCR6-005	1435	144aa	ENSP00000466276.1	Nonsense mediated decay		K7ELY4	-	-
ENST00000427407.1	DGCR6-006	1199	162aa	ENSP00000397633.2	Nonsense mediated decay		G5E9J8	-	-
ENST00000436645.1	DGCR6-003	812	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477156.1	DGCR6-007	524	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 1,039 bps, Translation length: 84 residues

Version

ENST00000413981.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000316632 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000413981.1 DGCR6-002

Summary