Transcript: ENST00000409682.3 PSMD14-001

Description

proteasome (prosome, macropain) 26S subunit, non-ATPase, 14 [Source:HGNC Symbol;Acc:16889]

Gene Synonyms

PAD1, POH1, RPN11, Rpn11, pad1

Location

About this transcript

This transcript has 12 exons, is annotated with 8 domains and features, is associated with 40409 variant alleles and maps to 521 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000409682.3	PSMD14-001	1954	310aa	ENSP00000386541.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46437	C9JW37 O00487 Q4ZG77 Q53TH1 Q96DE8	NM_005805.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000437630.1	PSMD14-002	577	84aa	ENSP00000399311.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JW37	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477232.1	PSMD14-005	4890	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492908.1	PSMD14-006	1786	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478123.1	PSMD14-003	478	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 1,954 bps, Translation length: 310 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00487

CCDS

This transcript is a member of the Human CCDS set: CCDS46437

Version

ENST00000409682.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000332833 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.