Transcript: ENST00000408946.2 WIBG-001

Description

within bgcn homolog (Drosophila) [Source:HGNC Symbol;Acc:30258]

Gene Synonyms

PYM

Location

Chromosome 12: 56,295,197-56,321,697 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 12494 variant alleles and maps to 251 oligo probes.

Gene

This transcript is a product of gene ENSG00000170473.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000408946.2	WIBG-001	1226	204aa	ENSP00000386156.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41795	Q9BRP8	NM_032345.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000398213.4	WIBG-003	1073	203aa	ENSP00000381271.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44916	Q9BRP8	NM_001143853.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000454792.2	WIBG-002	884	77aa	ENSP00000402829.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VT68	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000557259.1	WIBG-007	775	44aa	ENSP00000452447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V5P2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000549939.1	WIBG-005	653	37aa	ENSP00000452291.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000547925.1	WIBG-004	499	45aa	ENSP00000448858.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8VXH2	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000302533.6	WIBG-006	890	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,226 bps, Translation length: 204 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BRP8

CCDS

This transcript is a member of the Human CCDS set: CCDS41795

Version

ENST00000408946.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000408079 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000408946.2 WIBG-001

Summary