Transcript: ENST00000405749.1 C2orf73-005

Description

chromosome 2 open reading frame 73 [Source:HGNC Symbol;Acc:26861]

Gene Synonyms

FLJ40298

Location

Chromosome 2: 54,558,039-54,610,331 forward strand.

About this transcript

This transcript has 5 exons, is associated with 22409 variant alleles and maps to 157 oligo probes.

Gene

This transcript is a product of gene ENSG00000177994.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398634.2	C2orf73-001	1921	287aa	ENSP00000381631.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46285	B7ZM11 Q8N5S3	NM_001100396.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000486488.1	C2orf73-003	802	223aa	ENSP00000417971.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J598	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000447328.1	C2orf73-004	656	211aa	ENSP00000389570.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZM12 E7ENW1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000405749.1	C2orf73-005	576	113aa	ENSP00000385348.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MBY8	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000317627.5	C2orf73-002	1713	59aa	ENSP00000325555.5	Nonsense mediated decay		F8WD05	-	-
ENST00000414747.1	C2orf73-006	560	82aa	ENSP00000403195.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000491538.1	C2orf73-007	622	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 576 bps, Translation length: 113 residues

Version

ENST00000405749.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000325001 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000405749.1 C2orf73-005

Summary