Transcript: ENST00000403263.1 INO80D-001

Description

INO80 complex subunit D [Source:HGNC Symbol;Acc:25997]

Gene Synonyms

FLJ20309

Location

About this transcript

This transcript has 11 exons, is annotated with 12 domains and features, is associated with 38612 variant alleles and maps to 849 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000403263.1	INO80D-001	14136	1027aa	ENSP00000384198.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46500	C9JLV2 C9JLZ4 Q53TQ3	NM_017759.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000424117.1	INO80D-004	1664	439aa	ENSP00000402369.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLZ4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000414320.1	INO80D-003	753	37aa	ENSP00000409031.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JLV2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 14,136 bps, Translation length: 1,027 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q53TQ3

CCDS

This transcript is a member of the Human CCDS set: CCDS46500

Version

ENST00000403263.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000336459 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.