Transcript: ENST00000401959.1 NHP2L1-002

Description

NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae) [Source:HGNC Symbol;Acc:7819]

Gene Synonyms

15.5K, FA-1, FA1, NHPX, OTK27, SNRNP15-5, SNU13, SPAG12, SSFA1

Location

Chromosome 22: 42,069,971-42,084,885 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 6993 variant alleles and maps to 374 oligo probes.

Gene

This transcript is a product of gene ENSG00000100138.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000401959.1	NHP2L1-002	1670	128aa	ENSP00000383949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14022	P55769 Q6FHM6	NM_005008.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000215956.5	NHP2L1-003	1630	128aa	ENSP00000215956.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14022	P55769 Q6FHM6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000355257.3	NHP2L1-001	1503	128aa	ENSP00000347401.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33653	P55769 Q6FHM6	NM_001003796.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000402458.1	NHP2L1-008	462	132aa	ENSP00000383989.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B1AHD1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000463675.1	NHP2L1-006	786	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469028.1	NHP2L1-007	736	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488571.1	NHP2L1-005	556	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000469522.1	NHP2L1-004	640	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,670 bps, Translation length: 128 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P55769

CCDS

This transcript is a member of the Human CCDS set: CCDS14022

Version

ENST00000401959.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000321682 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000401959.1 NHP2L1-002

Summary