Transcript: ENST00000400075.3 GABPA-001

Description

GA binding protein transcription factor, alpha subunit 60kDa [Source:HGNC Symbol;Acc:4071]

Gene Synonyms

E4TF1-60, E4TF1A, NFT2, NRF2, NRF2A, RCH04A07

Location

About this transcript

This transcript has 10 exons, is annotated with 21 domains and features, is associated with 15783 variant alleles and maps to 518 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354828.3	GABPA-002	5120	454aa	ENSP00000346886.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13575	A8IE48 Q06546	NM_001197297.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000400075.3	GABPA-001	4814	454aa	ENSP00000382948.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13575	A8IE48 Q06546	NM_002040.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000487266.1	GABPA-003	780	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 4,814 bps, Translation length: 454 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q06546

CCDS

This transcript is a member of the Human CCDS set: CCDS13575

Version

ENST00000400075.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000171364 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.