Transcript: ENST00000396212.2 CCP110-001

Description

centriolar coiled coil protein 110kDa [Source:HGNC Symbol;Acc:24342]

Gene Synonyms

CEP110, CP110, Cep110, KIAA0419

Location

Chromosome 16: 19,535,133-19,564,730 forward strand.

About this transcript

This transcript has 15 exons, is annotated with 7 domains and features, is associated with 11551 variant alleles and maps to 561 oligo probes.

Gene

This transcript is a product of gene ENSG00000103540.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381396.5	CCP110-002	5446	1012aa	ENSP00000370803.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55992	O43303	NM_001199022.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000396212.2	CCP110-001	5549	991aa	ENSP00000379515.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10579	O43303	NM_014711.4	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000396208.2	CCP110-201	5252	991aa	ENSP00000379511.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10579	O43303	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000565376.2	CCP110-008	698	50aa	ENSP00000454514.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BMS1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000561888.1	CCP110-009	360	120aa	ENSP00000459410.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L262	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000562083.1	CCP110-004	595	52aa	ENSP00000458123.1	Nonsense mediated decay		H3BVH3	-	-
ENST00000573412.1	CCP110-010	673	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569190.1	CCP110-003	2600	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000562616.1	CCP110-006	1679	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000567451.1	CCP110-007	1151	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000566523.1	CCP110-005	818	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 15, Coding exons: 13, Transcript length: 5,549 bps, Translation length: 991 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O43303

CCDS

This transcript is a member of the Human CCDS set: CCDS10579

Version

ENST00000396212.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000254283 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000396212.2 CCP110-001

Summary