Transcript: ENST00000395927.1 GRHL2-002

Description

grainyhead-like 2 (Drosophila) [Source:HGNC Symbol;Acc:2799]

Gene Synonyms

BOM, DFNA28, FLJ13782, TFCP2L3

Location

Chromosome 8: 102,504,986-102,679,121 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 3 domains and features, is associated with 75535 variant alleles and maps to 424 oligo probes.

Gene

This transcript is a product of gene ENSG00000083307.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000251808.3	GRHL2-001	5239	625aa	ENSP00000251808.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34931	Q6ISB3	NM_024915.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395927.1	GRHL2-002	2140	609aa	ENSP00000379260.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6ISB3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000521085.1	GRHL2-005	236	6aa	ENSP00000430473.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000517674.1	GRHL2-006	324	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472106.2	GRHL2-003	1178	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474338.1	GRHL2-004	388	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,140 bps, Translation length: 609 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ISB3

Version

ENST00000395927.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000313883 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000395927.1 GRHL2-002

Summary