Transcript: ENST00000395047.2 VDAC1-001

Description

voltage-dependent anion channel 1 [Source:HGNC Symbol;Acc:12669]

Gene Synonyms

MGC111064, PORIN, VDAC, VDAC-1

Location

Chromosome 5: 133,307,643-133,340,533 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 13972 variant alleles and maps to 651 oligo probes.

Gene

This transcript is a product of gene ENSG00000213585.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000265333.3	VDAC1-002	1953	283aa	ENSP00000265333.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4168	C9JI87 P21796	NM_003374.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395047.2	VDAC1-001	1873	283aa	ENSP00000378487.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4168	C9JI87 P21796	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000395044.3	VDAC1-003	1807	283aa	ENSP00000378484.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4168	C9JI87 P21796	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000425992.1	VDAC1-004	704	184aa	ENSP00000390129.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JI87	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000466080.1	VDAC1-005	831	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492324.1	VDAC1-006	635	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489906.1	VDAC1-007	694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,873 bps, Translation length: 283 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P21796

CCDS

This transcript is a member of the Human CCDS set: CCDS4168

Version

ENST00000395047.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000251164 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000395047.2 VDAC1-001

Summary