Transcript: ENST00000394708.2 TBCK-006

Description

TBC1 domain containing kinase [Source:HGNC Symbol;Acc:28261]

Gene Synonyms

HSPC302, MGC16169, TBCK, TBCKL

Location

Chromosome 4: 106,967,727-107,237,423 reverse strand.

About this transcript

This transcript has 26 exons, is annotated with 22 domains and features, is associated with 111185 variant alleles and maps to 650 oligo probes.

Gene

This transcript is a product of gene ENSG00000145348.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273980.5	TBCK-001	8101	893aa	ENSP00000273980.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54788	D6R950 D6RC61 D6RDG2 D6RDY5 Q8TEA7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000432496.2	TBCK-201	3362	893aa	ENSP00000405847.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54788	D6R950 D6RC61 D6RDG2 D6RDY5 Q8TEA7	NM_001163436.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000394706.3	TBCK-003	3349	854aa	ENSP00000378196.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54789	D6R950 D6RC61 D6RDG2 D6RDY5 Q8TEA7	NM_001163437.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000361687.4	TBCK-002	3312	830aa	ENSP00000355338.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3673	D6R950 D6RC61 Q8TEA7	NM_033115.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000394708.2	TBCK-006	3047	893aa	ENSP00000378198.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54788	D6R950 D6RC61 D6RDG2 D6RDY5 Q8TEA7	NM_001163435.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000509532.1	TBCK-019	848	159aa	ENSP00000420985.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R950 D6RDG2 D6RDY5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000503516.1	TBCK-013	601	56aa	ENSP00000423834.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RC61	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000509862.1	TBCK-008	600	105aa	ENSP00000425197.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R950 D6RDY5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507696.1	TBCK-009	579	68aa	ENSP00000423637.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R950	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000467183.2	TBCK-004	3566	153aa	ENSP00000421182.1	Nonsense mediated decay		D6R950 D6RDY5 Q5HYF5	-	-
ENST00000508666.1	TBCK-012	897	139aa	ENSP00000422160.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000503832.1	TBCK-011	865	85aa	ENSP00000423092.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000505574.1	TBCK-010	282	24aa	ENSP00000426093.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000514689.1	TBCK-015	703	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506615.1	TBCK-017	593	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515705.1	TBCK-014	592	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506384.1	TBCK-018	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511011.1	TBCK-016	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000506280.1	TBCK-005	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510927.1	TBCK-007	2826	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 25, Transcript length: 3,047 bps, Translation length: 893 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8TEA7

CCDS

This transcript is a member of the Human CCDS set: CCDS54788

Version

ENST00000394708.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000364297 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000394708.2 TBCK-006

Summary