Transcript: ENST00000392859.3 ARCN1-004

Description

archain 1 [Source:HGNC Symbol;Acc:649]

Gene Synonyms

COPD

Location

About this transcript

This transcript has 9 exons, is annotated with 10 domains and features, is associated with 12919 variant alleles and maps to 317 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000264028.4	ARCN1-001	3845	511aa	ENSP00000264028.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS8400	B0YIW5 P48444	NM_001655.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000359415.4	ARCN1-003	4038	552aa	ENSP00000352385.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B0YIW6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000392859.3	ARCN1-004	1709	423aa	ENSP00000376599.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44749	P48444	NM_001142281.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000534182.2	ARCN1-002	1669	83aa	ENSP00000431676.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PK34	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,709 bps, Translation length: 423 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P48444

CCDS

This transcript is a member of the Human CCDS set: CCDS44749

Version

ENST00000392859.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000389274 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.