Transcript: ENST00000392008.2 COPS8-002

Description

COP9 signalosome subunit 8 [Source:HGNC Symbol;Acc:24335]

Gene Synonyms

COP9, CSN8, MGC1297, SGN8

Location

Chromosome 2: 237,994,525-238,007,261 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 2 domains and features, is associated with 5838 variant alleles and maps to 591 oligo probes.

Gene

This transcript is a product of gene ENSG00000198612.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000354371.2	COPS8-001	4007	209aa	ENSP00000346340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2517	Q99627	NM_006710.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000392008.2	COPS8-002	1654	160aa	ENSP00000375865.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42835	Q99627	NM_198189.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409629.1	COPS8-004	1576	206aa	ENSP00000386838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B8ZZP3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000409334.1	COPS8-008	794	173aa	ENSP00000387212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PGT6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000419015.1	COPS8-005	584	64aa	ENSP00000388655.1	Nonsense mediated decay		F8WEF2	-	-
ENST00000447464.1	COPS8-007	496	83aa	ENSP00000413696.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000470452.1	COPS8-003	1005	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465362.1	COPS8-006	690	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 7, Transcript length: 1,654 bps, Translation length: 160 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q99627

CCDS

This transcript is a member of the Human CCDS set: CCDS42835

Version

ENST00000392008.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000329050 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000392008.2 COPS8-002

Summary