Transcript: ENST00000391403.2 CTAGE1-001

Description

cutaneous T-cell lymphoma-associated antigen 1 [Source:HGNC Symbol;Acc:24346]

Gene Synonyms

CT21.1, CT21.2, CTAGE, CTAGE-1, CTAGE-2, CTAGE2, cTAGE-1, cTAGE-2

Location

About this transcript

This transcript has 1 exon, is annotated with 15 domains and features, is associated with 2738 variant alleles and maps to 420 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000391403.2	CTAGE1-001	4306	745aa	ENSP00000375220.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45837	Q8NEG8 Q96RT6	NM_172241.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000525417.1	CTAGE1-002	1267	74aa	ENSP00000436900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9HC47	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 4,306 bps, Translation length: 745 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96RT6

CCDS

This transcript is a member of the Human CCDS set: CCDS45837

Version

ENST00000391403.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript having same CDS:	OTTHUMT00000386768 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.