Transcript: ENST00000381423.1 TGM6-002

Description

transglutaminase 6 [Source:HGNC Symbol;Acc:16255]

Gene Synonyms

SCA35, TG6, TGM3L, TGY, dJ734P14.3

Location

About this transcript

This transcript has 12 exons, is annotated with 15 domains and features, is associated with 23591 variant alleles and maps to 321 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000202625.2	TGM6-001	2292	706aa	ENSP00000202625.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13025	O95932	NM_198994.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381423.1	TGM6-002	2158	625aa	ENSP00000370831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58761	O95932	NM_001254734.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000477505.1	TGM6-003	620	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,158 bps, Translation length: 625 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95932

CCDS

This transcript is a member of the Human CCDS set: CCDS58761

Version

ENST00000381423.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000105467 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.