Transcript: ENST00000381192.3 CD99-001

Description

CD99 molecule [Source:HGNC Symbol;Acc:7082]

Gene Synonyms

HBA71, MIC2, MIC2X, MIC2Y, MSK5X

Location

Chromosome X: 2,609,220-2,659,350 forward strand.

About this transcript

This transcript has 10 exons, is annotated with 10 domains and features, is associated with 23549 variant alleles and maps to 808 oligo probes.

Gene

This transcript is a product of gene ENSG00000002586.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000381192.3	CD99-001	1245	185aa	ENSP00000370588.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14119	P14209	NM_002414.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381184.1	CD99-004	918	177aa	ENSP00000370579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A8MQT7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381187.3	CD99-003	892	169aa	ENSP00000370582.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48071	P14209	NM_001122898.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000449611.1	CD99-005	604	201aa	ENSP00000405544.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C2F2	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000381180.3	CD99-002	530	76aa	ENSP00000370573.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6NJT9	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000381177.1	CD99-008	756	61aa	ENSP00000370570.2	Nonsense mediated decay		A6NGF6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000482405.2	CD99-009	842	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497752.1	CD99-007	806	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482293.1	CD99-006	466	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,245 bps, Translation length: 185 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P14209

CCDS

This transcript is a member of the Human CCDS set: CCDS14119

Version

ENST00000381192.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055624 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381192.3 CD99-001

Summary