Transcript: ENST00000380620.4 B3GALT5-001

Description

UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5 [Source:HGNC Symbol;Acc:920]

Gene Synonyms

B3GalT-V, B3GalTx, B3T5, GLCT5, beta-1,3-GalTase 5, beta-3-Gx-T5, beta3Gal-T5

Location

Chromosome 21: 40,928,369-41,045,064 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 4 domains and features, is associated with 48635 variant alleles and maps to 487 oligo probes.

Gene

This transcript is a product of gene ENSG00000183778.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000380620.4	B3GALT5-001	13170	310aa	ENSP00000369994.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13667	Q9Y2C3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000380618.1	B3GALT5-002	2763	310aa	ENSP00000369992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13667	Q9Y2C3	NM_033170.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000343118.4	B3GALT5-201	2606	310aa	ENSP00000343318.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13667	Q9Y2C3	NM_033171.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000398714.2	B3GALT5-202	2446	310aa	ENSP00000381699.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS13667	Q9Y2C3	NM_033172.2	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000475838.1	B3GALT5-003	658	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 1, Transcript length: 13,170 bps, Translation length: 310 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9Y2C3

CCDS

This transcript is a member of the Human CCDS set: CCDS13667

Version

ENST00000380620.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000195008 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000380620.4 B3GALT5-001

Summary