Transcript: ENST00000377246.3 SCEL-001

Description

sciellin [Source:HGNC Symbol;Acc:10573]

Gene Synonyms

FLJ21667, MGC22531

Location

About this transcript

This transcript has 32 exons, is annotated with 9 domains and features, is associated with 44656 variant alleles and maps to 948 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000349847.3	SCEL-002	2386	688aa	ENSP00000302579.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9459	O95171	NM_144777.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000535157.1	SCEL-201	3096	646aa	ENSP00000437895.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS53877	O95171	NM_001160706.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000377246.3	SCEL-001	3081	668aa	ENSP00000366454.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS9458	O95171	NM_003843.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000471491.1	SCEL-003	2269	283aa	ENSP00000432840.1	Nonsense mediated decay		F2Z2X8	-	-
ENST00000469982.1	SCEL-004	590	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 32, Coding exons: 31, Transcript length: 3,081 bps, Translation length: 668 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O95171

CCDS

This transcript is a member of the Human CCDS set: CCDS9458

Version

ENST00000377246.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000045338 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.