Description
heparan sulfate proteoglycan 2 [Source:HGNC Symbol;Acc:5273]
Gene Synonyms
HSPG, PLC, PRCAN, SJA, SJS, SJS1, perlecan
Location
Chromosome 1: 22,148,738-22,263,790 reverse strand.
About this transcript
This transcript has 97 exons, is annotated with 297 domains and features, is associated with 55717 variant alleles and maps to 2514 oligo probes.
Gene
This transcript is a product of gene ENSG00000142798.12 Show transcript tableHide transcript table
| Transcript ID | Name | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ENST00000374695.3 | HSPG2-001 | 14327 | 4391aa | ENSP00000363827.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS30625 | B6EU51 P98160 | NM_005529.5 | A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, |
| ENST00000430507.1 | HSPG2-201 | 2433 | 163aa | ENSP00000416385.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | H7C4A6 | - | A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, | |
| ENST00000426143.1 | HSPG2-013 | 856 | 187aa | ENSP00000392022.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5SZJ1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, | |
| ENST00000412328.1 | HSPG2-003 | 828 | 239aa | ENSP00000405412.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5SZI5 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000439717.2 | HSPG2-005 | 637 | 190aa | ENSP00000395884.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5SZJ2 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000453796.1 | HSPG2-015 | 621 | 207aa | ENSP00000396310.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | Q5SZI9 | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000427897.1 | HSPG2-008 | 589 | 197aa | ENSP00000397573.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000374673.3 | HSPG2-004 | 538 | 179aa | ENSP00000363805.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete, | |
| ENST00000374676.4 | HSPG2-010 | 411 | 94aa | ENSP00000363808.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, | |
| ENST00000486901.1 | HSPG2-002 | 3586 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000481644.1 | HSPG2-012 | 839 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000471322.1 | HSPG2-014 | 601 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000493940.2 | HSPG2-009 | 584 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000498495.1 | HSPG2-007 | 488 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000469378.1 | HSPG2-011 | 417 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | - | |
| ENST00000480900.1 | HSPG2-006 | 500 | No protein | - | An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron | - | - | - |