Transcript: ENST00000373795.4 SRSF4-001

Description

serine/arginine-rich splicing factor 4 [Source:HGNC Symbol;Acc:10786]

Gene Synonyms

SFRS4, SRP75

Location

Chromosome 1: 29,474,255-29,508,499 reverse strand.

About this transcript

This transcript has 6 exons, is annotated with 18 domains and features, is associated with 16544 variant alleles and maps to 449 oligo probes.

Gene

This transcript is a product of gene ENSG00000116350.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000373795.4	SRSF4-001	2387	494aa	ENSP00000362900.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS333	Q08170	NM_005626.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000546138.1	SRSF4-201	1591	158aa	ENSP00000444600.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6T1J1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000605204.1	SRSF4-007	1399	160aa	ENSP00000473728.1	Nonsense mediated decay		S4R2X6	-	-
ENST00000466448.1	SRSF4-002	1264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472353.1	SRSF4-006	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000497015.1	SRSF4-005	516	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489898.1	SRSF4-004	393	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477193.1	SRSF4-003	206	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 2,387 bps, Translation length: 494 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08170

CCDS

This transcript is a member of the Human CCDS set: CCDS333

Version

ENST00000373795.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000010392 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000373795.4 SRSF4-001

Summary