Transcript: ENST00000370757.3 PTGFR-001

Description

prostaglandin F receptor (FP) [Source:HGNC Symbol;Acc:9600]

Gene Synonyms

Location

About this transcript

This transcript has 3 exons, is annotated with 32 domains and features, is associated with 20890 variant alleles and maps to 382 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370757.3	PTGFR-001	4379	359aa	ENSP00000359793.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS686	P43088	NM_000959.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000370756.3	PTGFR-003	4450	297aa	ENSP00000359792.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30759	P43088	NM_001039585.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000370758.1	PTGFR-002	4337	359aa	ENSP00000359794.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS686	P43088	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000497923.1	PTGFR-004	1852	297aa	ENSP00000432599.1	Nonsense mediated decay		F2Z2Z6	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 4,379 bps, Translation length: 359 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P43088

CCDS

This transcript is a member of the Human CCDS set: CCDS686

Version

ENST00000370757.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000026582 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.