Transcript: ENST00000370357.4 PASD1-001

Description

PAS domain containing 1 [Source:HGNC Symbol;Acc:20686]

Gene Synonyms

CT63, OXTES1

Location

About this transcript

This transcript has 16 exons, is annotated with 14 domains and features, is associated with 36710 variant alleles and maps to 572 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370357.4	PASD1-001	3163	773aa	ENSP00000359382.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35431	Q8IV76	NM_173493.2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000464219.1	PASD1-002	4098	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 3,163 bps, Translation length: 773 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IV76

CCDS

This transcript is a member of the Human CCDS set: CCDS35431

Version

ENST00000370357.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000060879 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.