Transcript: ENST00000370081.2 COX7A2-002

Description

cytochrome c oxidase subunit VIIa polypeptide 2 (liver) [Source:HGNC Symbol;Acc:2288]

Gene Synonyms

COX7AL, COX7AL1, COXVIIAL, COXVIIa-L, VIIAL

Location

Chromosome 6: 75,947,391-75,960,039 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 5544 variant alleles and maps to 469 oligo probes.

Gene

This transcript is a product of gene ENSG00000112695.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370081.2	COX7A2-002	914	115aa	ENSP00000359098.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34486	H0UI06	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000370089.2	COX7A2-003	773	115aa	ENSP00000359106.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34486	H0UI06	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000230459.4	COX7A2-201	699	83aa	ENSP00000230459.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		P14406	NM_001865.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000509698.1	COX7A2-008	480	91aa	ENSP00000425951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RIE3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000377978.3	COX7A2-007	366	103aa	ENSP00000421193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGV5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000460985.1	COX7A2-005	357	53aa	ENSP00000422979.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6R9C3	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000472311.2	COX7A2-006	325	76aa	ENSP00000423432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RA35	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000459637.2	COX7A2-001	501	67aa	ENSP00000421969.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000481061.2	COX7A2-004	914	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 914 bps, Translation length: 115 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS34486

Version

ENST00000370081.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000041242 (version 4)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Transcript: ENST00000370081.2 COX7A2-002

Summary