Transcript: ENST00000369912.2 TKTL1-001

Description

transketolase-like 1 [Source:HGNC Symbol;Acc:11835]

Gene Synonyms

TKR, TKT2

Location

Chromosome X: 153,533,409-153,558,700 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 13 domains and features, is associated with 11150 variant alleles and maps to 528 oligo probes.

Gene

This transcript is a product of gene ENSG00000007350.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369915.3	TKTL1-002	2642	596aa	ENSP00000358931.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS35448	B7Z7I0 P51854 Q5TYJ8	NM_012253.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000369912.2	TKTL1-001	2566	540aa	ENSP00000358928.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55541	Q5TYJ8	NM_001145934.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000217905.7	TKTL1-201	1278	336aa	ENSP00000217905.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z7M4	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000426989.1	TKTL1-005	622	197aa	ENSP00000401111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ID95	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000426203.1	TKTL1-006	525	175aa	ENSP00000416552.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ID96	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000439635.1	TKTL1-009	560	127aa	ENSP00000399763.1	Nonsense mediated decay		F8WF97	-	-
ENST00000482044.1	TKTL1-004	565	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000465168.1	TKTL1-007	555	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000463884.1	TKTL1-003	441	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 2,566 bps, Translation length: 540 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS55541

Version

ENST00000369912.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000058922 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000369912.2 TKTL1-001

Summary