Transcript: ENST00000369552.4 SLC35A1-001

Description

solute carrier family 35 (CMP-sialic acid transporter), member A1 [Source:HGNC Symbol;Acc:11021]

Gene Synonyms

CDG2F, CMPST, CST, hCST

Location

Chromosome 6: 88,182,695-88,222,054 forward strand.

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 16281 variant alleles and maps to 466 oligo probes.

Gene

This transcript is a product of gene ENSG00000164414.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369552.4	SLC35A1-001	1851	337aa	ENSP00000358565.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5010	B4DEM1 P78382 Q5W1L6	NM_006416.4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000369556.3	SLC35A1-201	1720	278aa	ENSP00000358569.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55043	P78382 Q5W1L6	NM_001168398.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000544441.1	SLC35A1-203	1207	203aa	ENSP00000438603.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DEM1	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000369557.5	SLC35A1-202	770	189aa	ENSP00000358570.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5W1L6 Q5W1L7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000464978.1	SLC35A1-002	1299	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,851 bps, Translation length: 337 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P78382

CCDS

This transcript is a member of the Human CCDS set: CCDS5010

Version

ENST00000369552.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000041446 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000369552.4 SLC35A1-001

Summary